Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936574.1_cds_XP_016482095.1_73358
CDS Infomation

[gene=LOC107803012] [db_xref=GeneID:107803012] [protein=geranylgeranyl diphosphate reductase, chloroplastic-like] [protein_id=XP_016482095.1] [location=35581..36942] [gbkey=CDS]
Sequence

ATGGCCGCCCAAACACACCTTCTTCACCCTCTTCACTGTCTTCCAGTTTCACTCAAAACC
CAAAACCCACAAAAGCAATGCCATTACTTCAAACAAAAGCCCATAAATCCAGTTGTCTCC
AAGCTTCGAGCAGCCGTTATAGGCGGAGGCCCAGCTGGATCTTCAGCTGCAGAAGCTTTA
GCCACCGGCGGTATCGAAACTTTCCTCTTCGAACGCAGCCCAGCTACAGCCAAGCCATGC
GGCGGCGCCATTCCACTTTGCATGCTCGACGAGTTCTCGATACCTTATCACCTCATCGAT
CGGCGCGTCACTCAGATGAGAATCATTTCTCCGTCGAATCTCGTCGTCGATTTCGGAAAA
ACCCTAAAACCGCACGAGTTCATCGCCATGCTCCGCCGTGAAGTCCTCGACTCGTTCCTC
CGCCGCCGCGCCGAGTCTAGCGGCGCCACTCTCATGAAAGCGCTGGTCACTAACCTCGTG
GTCCCCACATCCTTACACGAGCCGTATGTGATTCATTACACTATGGATAATTGCCAGCGT
CAGCTCGCCGTCGATGTAATCGTCGGCGCCGACGGAGCCAATAGCCGGGTTGCTAAATCG
ATCAAAGCTGGAAATTACGCTACTGCCATTGCTTTCCAAGAGAGGATTAAATTGCCCGAG
GACAAAATGGGGTATTACGAAAATTTGGCTGAGATGTACGTGGGGAATGACGTGTCACCC
GATTTTTACGCGTGGGTGTTTCCTAAATGCGACCACGTGGCAGTGGGGACGGGCACGGTG
TGCTCAAAGTCTAATATTAAGTTATTTCAGCACGGTATCAGAGCACGAGTCAGACCAAAG
ATCGACGGCGGGAGAGTGATTAAGGTGGAGGCACATCCAATACCGGAGCACCCGCGCCCG
GTTCGAGTACGTGGACGGGTTGCTCTAGTAGGAGATGCGGCAGGATACGTGACAAAATGT
TCGGGCGAAGGAATATATTTTGCAGCAAAAAGTGGAAGAATTTGTGGGGAAGCAATTGTG
AAGGCCTCACAAGGTGGAGAAAAAATGATTAGTGAAGATGATTTGAAAAGGGTGTATTTA
AGAAAGTGGGATGACAAGTATTTCACAACTTTCAAGTTTTTGGATATATTGCAAAAAGTG
TTTTATGGTAGCAATGCAGCAAGGGAAGCATTAGTGGAGTTGTGTGGAGATGAATATGTG
CAAAGGATGACATTTGATAGCTACTTGTATAAGAAATTAGCTACTGGCAATAGATTGAAT
GATGCTACAATGGTGATGAACACAATTTCAAGTTTGGTTAGGTGTAATATTATGGGACGA
GAAGTTGATGCATCTGCCCAAAAAATACTCTCACGAGTATAA

Peptide Sequence

PEP ID

XP_016482095.1
PEP Infomation

PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAQTHLLHPLHCLPVSLKTQNPQKQCHYFKQKPINPVVSKLRAAVIGGGPAGSSAAEAL
ATGGIETFLFERSPATAKPCGGAIPLCMLDEFSIPYHLIDRRVTQMRIISPSNLVVDFGK
TLKPHEFIAMLRREVLDSFLRRRAESSGATLMKALVTNLVVPTSLHEPYVIHYTMDNCQR
QLAVDVIVGADGANSRVAKSIKAGNYATAIAFQERIKLPEDKMGYYENLAEMYVGNDVSP
DFYAWVFPKCDHVAVGTGTVCSKSNIKLFQHGIRARVRPKIDGGRVIKVEAHPIPEHPRP
VRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRICGEAIVKASQGGEKMISEDDLKRVYL
RKWDDKYFTTFKFLDILQKVFYGSNAAREALVELCGDEYVQRMTFDSYLYKKLATGNRLN
DATMVMNTISSLVRCNIMGREVDASAQKILSRV

Transcript Sequence

Gene sequence data has not been registered.